Nucleophiles and Electrophiles: Crash Course Organic Chemistry #12 - By CrashCourse
Transcript
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00:05 | devices . Hi , I'm dave okay Chakravarty and welcome | |
00:08 | to Crash course Organic Chemistry . The word stem file | |
00:11 | , which is derived from the greek fellows meaning loving | |
00:14 | has been used with other prefixes or suffixes to suggest | |
00:17 | the love of just about everything . There's a philodendron | |
00:20 | , which is a plant that loves to climb trees | |
00:23 | or technophile , which describes a lover of new technologies | |
00:26 | . I might consider myself a bibliophile and I lure | |
00:29 | a file to profess my love of books and cats | |
00:32 | and maybe we can call ourselves organa files as people | |
00:35 | who love organic compounds in this episode though , will | |
00:38 | specifically be looking at two very important files , electro | |
00:41 | files , lovers of electrons and nuclear files . Lovers | |
00:44 | of the molecules positive regions . Over the last few | |
00:47 | episodes , we've been thinking about molecular hotspots , places | |
00:50 | on a molecule where positive charges and negative charges show | |
00:53 | up now it's time to think about what happens at | |
00:56 | these hotspots electro files and nuclear files . So my | |
00:59 | fellow organa files , let's get to it . Yeah | |
01:10 | . Yes . In the last episode we discussed Bronston | |
01:15 | , Lowry acids and bases where the acid is a | |
01:17 | proton donor in the basis of proton except er but | |
01:20 | there are molecules out there called Lewis acids and bases | |
01:23 | which accept or donate electron pairs instead of protons . | |
01:26 | Specifically Lewis acids , except a lone pair of electrons | |
01:30 | and Lewis bases donate a lone pair of electrons . | |
01:33 | LeWIS bases often include atoms with lone pairs like nitrogen | |
01:36 | and oxygen . For example , ammonia and water are | |
01:39 | LewiS bases . Other Lewis bases are negatively charged atoms | |
01:43 | like chloride or groups of atoms like hydroxide . Generally | |
01:46 | lewis bases are recognizable because they have lots of electron | |
01:49 | . So we call them electron rich . Lewis bases | |
01:52 | are also nuclear files . Technically if we go back | |
01:56 | to our word stem file , this means nucleus loving | |
01:59 | . But when it comes to reactions in organic chemistry | |
02:01 | being a nuclear file beans , they love to interact | |
02:04 | with positive charges or positive regions on another molecule . | |
02:07 | Think of it kind of like a superhero with the | |
02:10 | grappling hook . A nuclear file is kind of looking | |
02:12 | for a positive charge . It can throw its electrons | |
02:15 | toured and grab onto on the flip side . Lewis | |
02:17 | acids are positively charged atoms like a proton or molecules | |
02:21 | that are short a pair of electrons from an octet | |
02:23 | and have an empty p orbital . Like boring Bh | |
02:26 | three boring only has six electrons with neutral and it's | |
02:29 | empty P orbital can accept electrons . This general definition | |
02:33 | doesn't include compounds like phosphorus Penta chloride that can be | |
02:37 | considered nontraditional lewis acids , some of which will meet | |
02:40 | later in the series . Lewis acids are electron poor | |
02:43 | , which is why they're willing to accept lone pairs | |
02:45 | . And lewis acids are also electro files going back | |
02:48 | to our word stems , this means electron loving and | |
02:52 | inorganic chemistry reactions . Being an electro file means they | |
02:55 | love negatively charged electrons and other molecules and can even | |
02:59 | provoke them into interacting sometimes to continue my grappling hook | |
03:02 | metaphor , think of an electro file as a molecule | |
03:05 | with a big red video game like target on it | |
03:08 | saying grappling hooks here . One of the most important | |
03:11 | electro files we'll see throughout these videos are carbo cat | |
03:14 | ions . These are molecules with an sp two hybridized | |
03:17 | carbon atom and an empty P orbital which creates a | |
03:20 | positive charge . Keeping formal charges in mind . We | |
03:23 | can see that the carbon only has three bonds which | |
03:25 | contributes three valence electrons . A neutral carbon atom has | |
03:29 | four valence electrons , so four minus three is positive | |
03:32 | one and therefore it has a plus one formal charge | |
03:36 | now that we have nuclear files and electro files as | |
03:38 | our players for today . Let's get into the fun | |
03:41 | stuff . What happens when they run into each other | |
03:44 | in a lab , when a nuclear file reacts with | |
03:46 | anything , we call it a nuclear filic attack . | |
03:49 | If we think of organic reactions as carefully choreographed fight | |
03:52 | scenes , a nuclear filic attack is just one move | |
03:55 | in the superhero skill set , it can be one | |
03:58 | step in a larger chemical reaction or a powerful move | |
04:01 | all on its own . In a nuclear filic attack | |
04:03 | , nuclear files are always the aggressor and do the | |
04:06 | attacking . So curved reaction arrows always start on the | |
04:10 | nuclear file and are drawn to the electro file . | |
04:12 | Electro files aren't just innocent bystanders though , because they | |
04:15 | love electron so much they can sometimes provoke a nuclear | |
04:19 | file into attacking . Kind of like when you want | |
04:21 | someone to do something and you keep asking and asking | |
04:25 | and asking until they give in or you taunt them | |
04:28 | a little bit to go them on . Like I | |
04:30 | mentioned , a nuclear feel like attack can be part | |
04:32 | of a larger multi step chemical reaction . But in | |
04:34 | this episode we're going to start simple with a one | |
04:37 | step reaction involving a nuclear file and an electro file | |
04:41 | . You've got to learn how to punch before you | |
04:43 | start a martial arts film , you know ? So | |
04:45 | here we have two compounds , a hydroxide ion and | |
04:48 | one Clara butane . The hydroxide has lots of electrons | |
04:51 | and that negative charge . So it's pretty easy to | |
04:54 | figure out that it's our nuclear file . It's a | |
04:56 | little trickier to see that one . Clara butane is | |
04:58 | our electro file though . For that we have to | |
05:01 | remember what we learned in a previous episode about polarity | |
05:04 | . This chlorine carbon bond is polarized seriously . I'm | |
05:07 | not joking when I say that we're assembling an organic | |
05:10 | chemistry toolkit . All this knowledge builds in this bond | |
05:13 | . The electro negative chlorine is pulling electrons towards itself | |
05:17 | which gives the carbon a partial positive charge and the | |
05:19 | chlorine a partial negative charge . This makes that carbon | |
05:23 | and electro file , which is pretty attractive to the | |
05:25 | hydroxide ion . So when this reaction takes place , | |
05:28 | the hydroxide attacks that carbon and donates electrons . This | |
05:32 | is hydroxide is grappling hook move I guess hydroxide is | |
05:35 | basically batman here in the carbon chain is the side | |
05:38 | of a Gotham city building he wants to climb . | |
05:40 | Our carbon is only capable of making four bonds . | |
05:43 | So before we finish the reaction , we have to | |
05:45 | make sure we're not breaking the rules of science . | |
05:48 | The chlorine takes a pair of electrons with it to | |
05:50 | become a chloride ion and butin one all is left | |
05:53 | behind . So fight sequence done now there are different | |
05:56 | kinds of nuclear filic attacks that have different names for | |
05:59 | now we can just call this particular reaction and nuclear | |
06:02 | Felix substitution because the hydroxide basically substitutes in for the | |
06:06 | chlorine . We'll talk more about nuclear Felix substitution is | |
06:09 | and get more specific about naming them in a future | |
06:12 | episode . But it's helpful to start getting familiar with | |
06:15 | the general term for this kind of reaction . Now | |
06:17 | now you don't have to take my word for it | |
06:20 | that this reaction happens and that our fight sequences ended | |
06:22 | successfully with Butin one all we can actually see that | |
06:26 | this reaction happened with an experimental tool we've learned in | |
06:28 | this series infrared spectroscopy or IR IR provides information about | |
06:33 | the functional groups present in molecules by measuring bond vibrations | |
06:37 | and one of the most recognizable functional groups and I | |
06:40 | are is alcohol , which we have here in butte | |
06:42 | one . Also , if the nuclear filic attack goes | |
06:45 | as planned , we should see a big change in | |
06:47 | the spectrum to see this in action . Here's the | |
06:50 | IR spectrum for one Clara butane and here's the spectrum | |
06:53 | we get for the product of this particular reaction . | |
06:55 | There is a strong broad peak at 3300 wave numbers | |
06:59 | which is the O . H bond of an alcohol | |
07:01 | . So we can be pretty sure that button one | |
07:03 | hole was formed . So organic chemistry isn't really just | |
07:06 | magic . And guessing we can confirm what we draw | |
07:09 | on paper for our nuclear filic attack choreography with experimental | |
07:13 | tools like infrared spectroscopy . The reaction we just looked | |
07:16 | at started nuclear file hydroxide . It came in strong | |
07:19 | with a negative charge and attack that partial positive carbon | |
07:22 | in one fell swoop . But like I mentioned earlier | |
07:24 | , there are strong electro files out there too , | |
07:26 | which pester nuclear files into attacking . And carbo cat | |
07:30 | ions are some of the most pesky characters out there | |
07:33 | , taunting enough that even a weak nuclear file like | |
07:36 | water , will attack them . These nuclear feel like | |
07:38 | attacks are slightly more complicated fight sequences to choreograph . | |
07:42 | So they usually happen in two steps . Let's look | |
07:45 | at this example with a carbo cat , iron as | |
07:48 | our electro file and water as our nuclear file . | |
07:50 | The first step of the nuclear feel like attack is | |
07:52 | still initiated by the nuclear file . Water , a | |
07:56 | lone pair of electrons on oxygen attacks that positively charged | |
07:59 | carbon and donates electrons . Water shoots out a two | |
08:03 | electron grappling hook and makes a bond . Then in | |
08:05 | the second step , a second water molecule gangs up | |
08:08 | on this grappled molecule and gets in on the action | |
08:11 | In this case . Because the second water molecule attacks | |
08:14 | of proton , we can call this a deep pronation | |
08:16 | . It might be tempting to show the electrons going | |
08:19 | straight to the positive charge on the oxygen . But | |
08:22 | be careful oxygen obeys the octet rule and that move | |
08:25 | would give it 10 electrons . Before we can finish | |
08:27 | the reaction , we have to make sure we're not | |
08:29 | breaking the rules of science and hydrogen can't have two | |
08:32 | bonds . So a pair of electrons from the hydrogen | |
08:35 | oxygen bond hops to the positively charged oxygen atom , | |
08:39 | neutralizing the charge and a hydro nian molecule breaks away | |
08:42 | from the scuffle fight sequence . Done to some of | |
08:46 | this two step reaction , the carbo Catalan undergoes a | |
08:48 | nuclear filic attacked by one molecule of water . Then | |
08:51 | it gets deep originated by a second molecule of water | |
08:54 | . So we're left with an alcohol and a hydro | |
08:56 | nia . My on to show another two step reaction | |
08:58 | and practice or fight choreography with slightly different characters . | |
09:01 | Let's look at a different kind of nuclear file molecules | |
09:04 | with double and triple bonds like Calkins , al kinds | |
09:07 | and carbon Neil groups . Nuclear files are just groups | |
09:10 | with lots of electrons . So all these fit right | |
09:13 | in . For example , let's look at the reaction | |
09:15 | of cis butte tooling and hydrogen bromide . Remember hbr | |
09:19 | is a strong acid and ionized is completely to form | |
09:22 | H plus and br minus . The alcan has a | |
09:25 | double bond . So it's our nuclear file and ready | |
09:27 | to attack our electro file . The proton . So | |
09:30 | the double bond donates electrons by throwing it's pi electrons | |
09:33 | as a grappling hook and hooking the proton . When | |
09:35 | the falcon uses these two electrons to attack the proton | |
09:39 | . One of the two carbons previously involved in the | |
09:41 | double bond is short an electron and ends up positive | |
09:44 | . Now we're left with a super pesky carbo cat | |
09:46 | eye on is an electro file and the negatively charged | |
09:49 | bromide ion as a nuclear file , the positive charge | |
09:52 | on the carbo cat ion is irresistibly taunting to the | |
09:55 | bromide ion . So for the second step of this | |
09:57 | reaction , the bromide does a nuclear filic attack and | |
10:00 | forms to brahma butane fight sequence . Done . These | |
10:04 | two ended up as one unified dynamic duo or molecule | |
10:08 | . We're going to end this episode with one final | |
10:10 | nuclear file that you may have heard of before as | |
10:13 | a potent poison in victorian era mystery novels and beyond | |
10:17 | cyanide . It's a carbon atom triple bonded to a | |
10:19 | nitrogen atom and the carbon carries a negative charge . | |
10:23 | But now's our chance to see cyanide is way more | |
10:25 | than just a poison . It's a pretty cool molecule | |
10:28 | because it can do a nuclear filic attack to form | |
10:30 | a carbon carbon bond and being able to add carbons | |
10:34 | together is important in organic chemistry because it helps us | |
10:37 | make supersized molecules such as big drug molecules and medicine | |
10:41 | as a strong nuclear file . Cyanide can attack carbon | |
10:44 | one in an electro file like one bromo two metal | |
10:46 | heck saying this is another one of those nuclear Felix | |
10:49 | substitution . The cyanide latches on with a bond and | |
10:53 | pushes out the bro meet as a bromide ion . | |
10:55 | We'll see in future episodes how carbon chains with cyanide | |
10:58 | substitutes are super useful as gateways to other functional groups | |
11:02 | or just for elongating a shorter change . So with | |
11:04 | that we've gotten pretty familiar with the fight choreography of | |
11:07 | a nuclear filic attack . The arrows start with the | |
11:09 | electron pairs on our nuclear file and end on the | |
11:12 | positive region of our electro file . And with this | |
11:15 | knowledge we're getting closer to being able to puzzle out | |
11:17 | , not memorize lots of complicated reactions that make organic | |
11:21 | chemistry notoriously tricky . In this episode we have learned | |
11:24 | that nuclear files are louis basis that donate electrons and | |
11:27 | attack electro files . Electro files are lewis acids that | |
11:31 | are attacked by nuclear files . Ir spectra can help | |
11:35 | us understand if a reaction really does happen and cyanide | |
11:39 | is more than just a poison next time we'll get | |
11:42 | further into the nitty gritty of air pushing and reaction | |
11:44 | mechanisms . Let's face it , No one wants to | |
11:47 | memorize thousands of reactions . And if we can learn | |
11:50 | how to write good mechanisms , we won't have to | |
11:52 | . Thanks for watching this episode of Crash Course Organic | |
11:55 | Chemistry . If you want to help keep all Crash | |
11:57 | Course free for everybody forever , you can join our | |
12:00 | community on Patreon . Yeah . |
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