More Stereochemical Relationships: Crash Course Organic Chemistry #9 - By CrashCourse
Transcript
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00:05 | devices . Hi , I'm Debbie Chakravarty and welcome back | |
00:08 | to Crash course Organic Chemistry In episode eight , we | |
00:11 | discovered that some molecules had non super imposible mirror images | |
00:15 | called indian tumors and tumors have almost all of the | |
00:18 | same chemical and physical properties , like the same melting | |
00:21 | and boiling points , so it's tough to separate them | |
00:24 | , but they interact differently in Cairo environments , like | |
00:27 | how the receptors in our nose and on our tongues | |
00:30 | are pretty sensitive to carl molecules to an anti MERS | |
00:33 | might have very different smells and tastes . For instance | |
00:37 | , there's our Carbone and s Carbone also known by | |
00:40 | the mouthful of an Aipac name to metal five prop | |
00:44 | one and two . Well psycho hex two and one | |
00:47 | on . So I'm gonna stick with Carbone to . | |
00:49 | Most people are Carbone smells and tastes like experiment while | |
00:53 | s Carbone smells and tastes like carraway , those earthy | |
00:56 | tasting seeds that get sprinkled on top of rye bread | |
00:59 | . Now I don't know about you , but I | |
01:00 | don't want to go around chemistry lab tasting and smelling | |
01:03 | random chemicals to figure out what they are . It | |
01:06 | sounds kind of dangerous . So organic chemists can tell | |
01:09 | a nancy . Meyers apart in other ways like using | |
01:12 | light . Yeah , yeah . The light that surrounds | |
01:25 | us is generally moving well , actually vibrating in all | |
01:28 | directions , but a slotted disc or lens can filter | |
01:32 | out some of it to leave behind light that's vibrating | |
01:34 | in one direction called plane polarized light . Polarized sunglasses | |
01:38 | , for example , are designed to filter out the | |
01:40 | sunlight reflected off of horizontal services like lakes , roadways | |
01:44 | or even the hood of a car . These surfaces | |
01:47 | organize some of the scattered light that hits them so | |
01:49 | it gets aligned with the flat surface when it bounces | |
01:51 | towards us . Basically , some horizontal plane polarized light | |
01:55 | gets reflected into our eyes . Polarized sunglass lenses have | |
01:59 | a special coating of molecules that line up to block | |
02:02 | a lot of this horizontal light so there's less glare | |
02:04 | from horizontal light reflecting off flat surfaces , but other | |
02:08 | light can pass through . And if we hold to | |
02:11 | polarized sunglass lenses perpendicular to each other , the lenses | |
02:14 | appear to get very dark because we're blocking both horizontal | |
02:17 | and vertical light . By the way , this trip | |
02:18 | is not going to work with any plain old sunglasses | |
02:20 | you might have because non polarized lenses just generically filter | |
02:24 | out some light . But to bring this all back | |
02:26 | to an anti MERS , carol molecules also have cool | |
02:29 | interactions with plane polarized light . A single and anti | |
02:32 | armor of the Cairo molecule can rotate it left or | |
02:35 | right . And using an instrument called a Polaroid emitter | |
02:38 | . We can measure a molecule's ability to turn light | |
02:40 | . A polaroid meter has a light source and several | |
02:43 | played polarizing filters . There's also a rotate herbal one | |
02:47 | called in analyzing filter , which is attached to a | |
02:50 | protractor . To help us measure the angle of light | |
02:52 | . A solution of an antimatter is placed inside a | |
02:55 | sample chamber , which is sandwiched between the polarizing filters | |
02:58 | and the analyzing filter . We can turn the analyzing | |
03:01 | filter and observe how the light changes until we reach | |
03:04 | a point where the most light possible is getting through | |
03:07 | , which will probably involve some twisting back and forth | |
03:10 | . Then we read the angle on the protractor to | |
03:12 | see how much and in what direction the molecule rotated | |
03:15 | the light from the source . Like I mentioned , | |
03:17 | an anti murders of Carole molecules can rotate the plane | |
03:19 | polarized light either left or right . It's a physical | |
03:22 | property of the molecule like boiling point and melting point | |
03:26 | molecules that turn the light toward the left are called | |
03:28 | love derogatory and are given the simple L . Or | |
03:31 | minus molecules that turn the light to the right are | |
03:33 | called dextre rhoda Torrey and are labeled D or plus | |
03:37 | . We saw this nomenclature with L and D glucose | |
03:40 | in episode eight because the amount that the light gets | |
03:43 | rotated depends on things like the amount of carol molecules | |
03:46 | we have and properties of our poll . A remote | |
03:48 | er we can calculate the specific rotation of a molecule | |
03:51 | using a fairly simple equation Alpha observed is the reading | |
03:55 | from the protractor on the analyzing filter . C is | |
03:58 | the sample concentration and L . Is a property called | |
04:00 | the path length of the polarization . Er This gives | |
04:03 | the specific rotation which is dependent on the wavelength of | |
04:05 | the light and temperature at which the experiment was performed | |
04:08 | . The tricky part is there's no easy rule to | |
04:11 | guess whether an R n N . T . M | |
04:12 | . R . Or an S . And M . | |
04:13 | T . M . R . Will be lever Rhoda | |
04:15 | Torrey or dextrose auditory polar imagery is an experimentally determined | |
04:19 | property , which means we have to stick in the | |
04:21 | end . Tremors in a polaroid meter to see how | |
04:23 | they rotate light . No shortcuts . Sorry , for | |
04:26 | example , it was experimentally found that the S . | |
04:29 | And anti more of Carbone rotates plane polarized light to | |
04:32 | the right . To indicate that in its name we | |
04:35 | can add A plus S . Plus Carbone . The | |
04:37 | R . And anti more was found to rotate plane | |
04:39 | polarized light to the left , so it's R minus | |
04:42 | Carbone . So I guess there's one tiny shortcut here | |
04:45 | opposite in anti mars will turn plane polarized light in | |
04:48 | the same amount in opposite directions . When we only | |
04:51 | have one in anti murder in the sample chamber of | |
04:53 | a polaroid meter , it's called an optically pure sample | |
04:56 | , the light will rotate one way by a certain | |
04:58 | experimentally determined amount . But if we mix an equal | |
05:01 | amount of S plus Carbone and ar minus Carbone in | |
05:04 | the sample chamber , we have a systemic mixture . | |
05:07 | The light rotations cancel each other out , so we'd | |
05:09 | observe no change in the angle of plane polarized light | |
05:12 | . Sometimes chemical reactions make more of one an anti | |
05:15 | more than another . So when that happens we can | |
05:18 | use the known rotation of an optically pure sample and | |
05:21 | the observed rotation of whatever mixture we have to find | |
05:24 | the an anti american excess . This tells us the | |
05:27 | percentage of each an anti armor in the mixture , | |
05:29 | knowing what products we have is important because a set | |
05:32 | of an anti MERS can have really different properties in | |
05:35 | Cairo environments , like a chemical reaction or as medicines | |
05:38 | in our bodies . One could be helpful while another | |
05:42 | could be deadly . Polar imagery can help keep us | |
05:44 | safe and informed Not only that , but polar imagery | |
05:47 | is actually how we discovered stereo chemistry and an anti | |
05:50 | immersed in the first place . With a little help | |
05:52 | from wine . Let's go to the thought bubble . | |
05:55 | Sometimes you might open a bottle of wine and find | |
05:57 | some crystals that grow on the cork or settled at | |
06:00 | the bottom . These crystals , or salts derived from | |
06:03 | tart eric acid , which is commonly found in grapes | |
06:05 | . As early as 18 32 we knew that rhetoric | |
06:08 | acid salts could rotate plane polarized light . However , | |
06:11 | in 18 38 there were reports of a tart uric | |
06:14 | acid solution derived from the commercial production of the chemical | |
06:17 | that didn't rotate plane polarized light . These reports reached | |
06:20 | the desk of a young french biologist named louis Pasteur | |
06:24 | . Yes , that louis Pasteur who became known for | |
06:26 | pasteurization bacteria and other pivotal scientific ideas . The idea | |
06:31 | that presumably similar solutions of torturing acid salts both could | |
06:35 | and couldn't rotate plane polarized light was very bothersome to | |
06:39 | young louis . So he got some of the powder | |
06:41 | tart uric acid with no optical activity . And you | |
06:44 | said about growing crystals by letting the solvent slowly evaporate | |
06:48 | like growing rock candy on a string from a super | |
06:51 | concentrated solution of sugar and water . Then using a | |
06:54 | microscope pasture noticed that the salt crystals grew into different | |
06:57 | shapes to be clear . A visible difference in an | |
07:00 | anti more crystals is rare . It was mostly luck | |
07:03 | that he was studying torts eric acid . He separated | |
07:05 | the two different crystals using just a tweezer made solutions | |
07:08 | out of both types and found that the two solutions | |
07:11 | rotated plane polarized light in equal but opposite directions . | |
07:15 | This was the first description of an isolated set of | |
07:18 | an anti murders and this event is often considered the | |
07:20 | start of the study of stereo chemistry . Thanks thought | |
07:23 | bubble . Fresh off our history lesson , it might | |
07:26 | be helpful to revisit all the summers we've encountered so | |
07:28 | far . The first thing to remember is that this | |
07:30 | summer's all have the same molecular formula . In episode | |
07:33 | six , we met confirmation ally Summers . When we | |
07:36 | looked at newman projections , one molecule can have many | |
07:39 | of these I summers because they only differ in how | |
07:41 | the groups are arranged as we rotate around sigma bonds | |
07:45 | , constitutionalism . Others have different connections between the same | |
07:48 | number and type of atoms and stereo . It simmers | |
07:50 | have atoms connected in the same order , but different | |
07:53 | spatial relationships between them stereo . Its members that have | |
07:56 | non super imposible mirror images like S Carbone and our | |
08:00 | Carbone are in anti members . We also have miso | |
08:03 | compounds which are sort of in the same family of | |
08:05 | molecules . They have two or more Cairo centers but | |
08:08 | aren't kyra molecules because they have an internal plane of | |
08:11 | symmetry . We'll talk more about these in a minute | |
08:14 | . Finally , we have stereo customers that are not | |
08:16 | mere images at all , which are called diastolic murmurs | |
08:19 | . We also know geometric I summers like the cysts | |
08:22 | in transit summers around a double bond . These can | |
08:25 | technically be classified as diarrhea MERS , but we organic | |
08:29 | chemists more commonly referred to them as geometric I summers | |
08:32 | . Die astronomers can also be configuration al dia streamers | |
08:35 | which have the same adam layout , but a different | |
08:38 | three D . Space arrangement in a pair of dice | |
08:40 | hysteria , MERS , one or more of the Cairo | |
08:42 | centers will be the same , but some Cairo centers | |
08:45 | have to be different , for example , to configuration | |
08:48 | . I'll die astronomers are two R four s , | |
08:50 | four promo Penton to all and to S for S | |
08:53 | . For Roma Penton to all with all these different | |
08:55 | kinds of ice hammers , it might look almost impossible | |
08:58 | to look at a molecule and figure out the maximum | |
09:00 | number of customers that can have . But thankfully , | |
09:02 | organic chemists have done centuries of hard work so we | |
09:05 | can sit back and use a simple formula . And | |
09:08 | since we have wine on the mind , lets you | |
09:10 | start eric acid as our example . First we need | |
09:13 | to count the number of Cairo centers in our compound | |
09:15 | , which I'll just call end for now tart eric | |
09:17 | acid or 23 Die hydroxy butane . Die OIC acid | |
09:21 | has two stereo centers . So in Tartu uric acid | |
09:25 | and equals two . Then we can use the formula | |
09:27 | two to the power of end . To calculate the | |
09:29 | maximum number of stereo I summers two to the power | |
09:32 | of two is four . So tart eric acid should | |
09:34 | have four isobars max . Let's draw them . I | |
09:37 | think it's easiest to start with the hydrogen atoms pointing | |
09:40 | away from me . So I'm already following the convention | |
09:43 | that the lowest priority group is pointing away and I | |
09:46 | don't have to do too much extra work . So | |
09:48 | let's start with this summer and assigned the stereo chemistry | |
09:50 | of these two Kyrill centers . First of all , | |
09:52 | this carbon is directly bonded to the oxygen atom of | |
09:55 | this alcohol , which has an atomic number of eight | |
09:58 | . The other two groups are carbons within atomic number | |
10:01 | of six . So the alcohol is clearly the highest | |
10:04 | priority . Now , we need to choose the higher | |
10:06 | priority of the other two groups . Remember to think | |
10:09 | of the car back silic acid carbon as being bonded | |
10:11 | to three oxygen atoms , which each have an atomic | |
10:14 | number of eight . So the car back silic acid | |
10:16 | has higher priority over the other carbon that's bonded to | |
10:19 | only one oxygen atom and a lowly hydrogen atom with | |
10:22 | an atomic number of one . When we draw our | |
10:24 | arc it points counterclockwise . So we know this carol | |
10:27 | center is S . Now let's move over to the | |
10:30 | other carl carbon from highest to lowest . We have | |
10:33 | the oxygen of the alcohol , the car box silic | |
10:35 | acid , and then the carbon with the hydrogen and | |
10:38 | alcohol attached . And of course the hydrogen that points | |
10:41 | into the screen is in dead last . We can | |
10:44 | draw our ark and see this carl center is also | |
10:46 | S . So we get a name of two S | |
10:48 | three S . Start eric acid . Next let's draw | |
10:51 | the mirror image of this compound . If we use | |
10:53 | the same priorities to sign the stereo chemistry , we | |
10:56 | get a name of two R three R tart eric | |
10:58 | acid . Then for the 3rd december we can show | |
11:01 | one alcohol group coming towards us and the other pointing | |
11:04 | away from us . And finally the 4th december also | |
11:06 | has one alcohol group coming toward us and one pointing | |
11:09 | away from us . Just different ones . But wait | |
11:12 | , if we look at those two , I simmer | |
11:14 | side by side and then we rotate one around , | |
11:17 | we can overlap them . So the 3rd and 4th | |
11:20 | members of tart eric acid are actually just one molecule | |
11:24 | . This is because there's an internal plane of symmetry | |
11:26 | that we can see if we rotate around this bond | |
11:29 | . Now the internal plane of symmetry is clear to | |
11:31 | see it's a miso compound and we can call it | |
11:34 | miso tortilla , ric acid . After all that investigation | |
11:36 | , we know that rhetoric asset has three I summer | |
11:38 | . So we always need to think critically about the | |
11:41 | molecules . We draw . An organic chemistry are two | |
11:44 | to the power of N formula helps us make sure | |
11:46 | we don't miss any I summers , but we have | |
11:48 | to make sure that too aren't actually the same thing | |
11:50 | . Stereo chemistry plays an important role in how molecules | |
11:53 | interact with one another from smells to medicines . So | |
11:56 | let's try to keep all this in mind for the | |
11:58 | puzzles to come in this episode , we learned about | |
12:00 | polar imagery and how an anti murders of Carole molecules | |
12:03 | rotate plane polarized light in opposite directions , measuring an | |
12:07 | anti America excess in an unequal mixture of an anti | |
12:10 | Mursi with a polaroid Mitter . That rahimic mixtures contain | |
12:14 | equal amounts of an anti Mursi and don't rotate plane | |
12:16 | polarized light . And we did a recap of Constitutional | |
12:20 | I simmers stereo I summers and and tumors and dietary | |
12:24 | immerse . Next week we'll dive into water . The | |
12:27 | molecule not an actual pool to talk about polarity and | |
12:30 | how to show electrons moving around a structure . Thanks | |
12:33 | for watching this episode of Crash course Organic Chemistry . | |
12:35 | If you want to help keep all crash course free | |
12:38 | for everybody forever , you can join our community on | |
12:41 | Patreon . No . |
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